@inbook{BauerBook2014, abstract = {In diagnostic neuroradiology as well as in radiation oncology and neurosurgery, there is an increasing demand for accurate segmentation of tumor-bearing brain images. Atlas-based segmentation is an appealing automatic technique thanks to its robustness and versatility. However, atlas-based segmentation of tumor-bearing brain images is challenging due to the confounding effects of the tumor in the patient image. In this article, we provide a brief background on brain tumor imaging and introduce the clinical perspective, before we categorize and review the state of the art in the current literature on atlas-based segmentation for tumor-bearing brain images. We also present selected methods and results from our own research in more detail. Finally, we conclude with a short summary and look at new developments in the field, including requirements for future routine clinical use.}, author = {Bauer S. and Wiest R. and Slotboom J. and Reyes M.}, booktitle = {Tumors of the Central Nervous System, Vol. 12}, date-added = {2012-11-02 16:03:57 +0000}, date-modified = {2014-06-16 11:54:03 +0000}, edition = {M. A. Hayat, Ed.}, editor = {Hayat, M.A.}, pages = {159-169}, publisher = {Springer Berlin / Heidelberg}, title = {Atlas-based Segmentation of Tumor-bearing Brain Images}, url = {http://www.springer.com/biomed/cancer/book/978-94-007-7216-8}, volume = {12}, year = {2014}, Bdsk-File-1 = {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}, Bdsk-Url-1 = {http://www.springer.com/series/8812}}